Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLFYFSAIIASVILNFVGIIMNLFITVVNCKTWVKSHRISSSDRILFSLGITRFLMLGLFLVNTI-YFVSSNTERSVY-LSAFFVLCFMFLDSSSVWFVTLLNILYCVKITNFQHSVFLLLKRNISPKIPRLLLACVLISAFTTCLYITLSQASPFPELVTTRNNTSF-NISE-GILSLVVSLVLSSSLQFIINVTSASLLIHSLRRHIQKMQKNATGFWNPQTEAHVGAMKLMVYFLILYIPYSVATLVQYLPFYAGMDMGTKSICLIFATLYSPGHSVLIIITHPKLKTTAKKILCFKK |
| 3RZE Chain:A ((10-204)) | -------PLVVVLSTICLVTVGLNLLVLYAVRSE---RKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSK-WSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQ---PLRYL-KYRTKTRASATILGAWFLSFLWVIPILGWNH----------RREDKCETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RZE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111620 for 1167 contacts (-95.6/contact) +
2D Compatibility (PS) -18458 + (NN) -3715 + (LL) 2496
1D Compatibility (HY) -15600 + (ID) 1150
Total energy: -148047.0 ( -126.86 by residue)
QMean score : 0.193
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