Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH
3QS9 Chain:A ((3-132))
----------------------------DCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQC-----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QS9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96041 for 933 contacts (-102.9/contact) +
2D Compatibility (PS) -14093 + (NN) -9762 + (LL) 6132
1D Compatibility (HY) -20400 + (ID) 6500
Total energy: -140664.0 ( -150.77 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_3QS9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QS9-query.scw
PDB file :
Tito_Scwrl_3QS9.pdb
: