Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGEAICSALPTIPYHKLADLRYLSRGASGTVSSARHADWR-VQVAVKHLHIHTPLLDSER-KDVLREAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKTEYPDVAWPLRFRILHEIALGVNYLHNMTPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIIYMPPE--NYEPGQKSRASIKHDIYSYAVITWEVLSRKQPFEDVTNPLQIMYSVSQGHRPVINEESLPYDIPHRARMISLIESGWAQNPDERPSFLKCLIELEPVLRTFEEITFLEAVIQLKKTKLQSVSSAIHLCDKKKMELSLNIPVNHGPQEESCGSSQLHENSGSPETSRSLPAPQDNDFLSRKAQDCYFMKLHHCPGNHSWDSTISGSQRAAFCDHKTTPCSSAIINPLSTAGNSERLQPGIAQQWIQSKREDIVNQMTEACLNQSLDALLSRDLIMKEDYELVSTKPTRTSKVRQLLDTTDIQGEEFAKVIVQKLKDNKQMGLQPYPEILVVSRSPSLNLLQNKSM |
| 3P86 Chain:A ((34-298)) | ------------IPW---CDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQD--FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDF-----------------GTPE-----WMAPEVLRDEPSNE-----KSDVYSFGVILWELATLQQPWGNL-NPAQVVAAVGFKCKRL----EIPRNL--NPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P86.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -153829 for 1886 contacts (-81.6/contact) +
2D Compatibility (PS) -25940 + (NN) -17879 + (LL) 17820
1D Compatibility (HY) -20000 + (ID) 4300
Total energy: -204128.0 ( -108.23 by residue)
QMean score : 0.460
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