Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ALSAAQCKEERRLGLNACKPVIY-GKLPSPACCERVRVSHVECVCPVIT-PKLAALIDLDRAIRLIEGCGRRVPRHFKCGSITTP
1L6H Chain:A ((1-69))
----AGCNAGQ---LTVCTGAIAGGARPTAACCSSLR-AQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP---TCH-----
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20508 for 499 contacts (-41.1/contact) +
2D Compatibility (PS) -6605 + (NN) -212 + (LL) 1148
1D Compatibility (HY) -4000 + (ID) 950
Total energy: -31127.0 ( -62.38 by residue)
QMean score : 0.100
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: