Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QTCPSQLNSLNVCAPFVVPGATNTNPNAECCSALQSVEH----------DCLCNTL----------RIAARLPSQCNL-------APVNCGNW
1AFH Chain:A ((3-91))
-SCGQVASAIAPCISYARGQG--SGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSR-
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37903 for 408 contacts (-92.9/contact) +
2D Compatibility (PS) -6595 + (NN) -4638 + (LL) 248
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -52088.0 ( -127.67 by residue)
QMean score : 0.495
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: