Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QECGNDLSNVQVCAAMVLPGSGRPNSECCAALQSTNR----------DCLCNA----------LRAATSLPSLCNLPPVDCGINT
1AFH Chain:A ((3-77))
-SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGV---------
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23507 for 371 contacts (-63.4/contact) +
2D Compatibility (PS) -5594 + (NN) -1708 + (LL) 16
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -33593.0 ( -90.55 by residue)
QMean score : 0.283
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: