Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGEC--GKSSPDN------EALKLAPCAEAAQDQNAAVSASCCDQVRKIGQSPSCLCAVMLSNTA------------KASGIKPEIA-ITIPKRCNI--------ANRPVGYKCGPYTLP
1HSS Chain:A ((5-124))
--MCYPGQAFQVPALPACRPLLRLQCNGS--QVP-EAVLRDCCQQLAHI--SEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25590 for 519 contacts (-49.3/contact) +
2D Compatibility (PS) -8965 + (NN) -8043 + (LL) 52
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -48446.0 ( -93.34 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: