Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCPQTIT-FSPCLTNVGNTGTPPAYDSQCCKLVR----------DPKWTDQCLCAVVSSHFPGVDETKALNLAHDCGRRVP------KGIYCDGRPVPP
1BWO Chain:A ((1-90))
IDCGHVDSLVRPCLSYVQGGP-GP--SGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG--VNLPYTISLNIDCSRV----
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15256 for 456 contacts (-33.5/contact) +
2D Compatibility (PS) -7843 + (NN) -5377 + (LL) 184
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -32092.0 ( -70.38 by residue)
QMean score : 0.193
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: