Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSLSQVRTCTSAVIAPNQMPSQQCCSELSAITDFNCFCSMLLNQGTNLNQDYIN--NALLIPSKCGEQGRNLRGQRCGNYAIP
1L6H Chain:A ((2-65))
GCNAGQLTVCTGAIAGG-ARPTAACCSSLRAQ--QGCFCQFAKDP--RYG-RYVNSPNARKAVSSCGIAL--------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32150 for 435 contacts (-73.9/contact) +
2D Compatibility (PS) -6187 + (NN) -509 + (LL) 344
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: -41552.0 ( -95.52 by residue)
QMean score : 0.270
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: