Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAQCGGRNLSILAPCLPAAKANVQPSAACCRALSSFAT--NTG----EDCLCAAASSQQQSGAKVEFAKYIPQKCQLTYK----AGIVCNGVVIPGGQ
1BWO Chain:A ((7-88))
--------DSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLNEDNARSIPPKCGVNLPYTISLNIDCS--------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24282 for 437 contacts (-55.6/contact) +
2D Compatibility (PS) -7451 + (NN) -3999 + (LL) 168
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -40014.0 ( -91.57 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: