Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-ALSCSTVYNTLMPCLGYVQSGGTVP--RACCTGIKRLVSGARSTQDRRTVCVCLKNVSSGAKG-GPYLTRAAGLPARCGVPLPYKTGPNDSCSSIPIYW
2RKN Chain:A ((1-77))
AIDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA----------DFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP------TC-------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44812 for 478 contacts (-93.7/contact) +
2D Compatibility (PS) -7703 + (NN) -3874 + (LL) 512
1D Compatibility (HY) 400 + (ID) 850
Total energy: -56327.0 ( -117.84 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: