Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-EVSCGDSVRALIPCGSFLVGADAAAAPSESCCRGALALRGMASTTAARRELCKCLM-QSGPSFGVLPDRARQLPARCNLGVAIPVGPETDCDKIP
2RKN Chain:A ((1-77))
AIDLCGMSQDELNECKPAVSKENPTS-PSQPCCTAL--------QHADFACLCGYKNSPWLGSFGVDPELASALPKQCG------LANAPTC----
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28991 for 514 contacts (-56.4/contact) +
2D Compatibility (PS) -7936 + (NN) -4723 + (LL) 1348
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: -44202.0 ( -86.00 by residue)
QMean score : 0.255
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: