Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQPANCNGQLNQLIPCLSYVQGQATQPAQSCCSGLKSIAG-----SNPACLCSLISANAGSIPGI-NSTLALELPAKCNLQGLNPSLCSVFISGFLPLR
1BWO Chain:A ((1-90))
----IDCGHVDSLVRPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG--VNLPYTISLNIDCSRV--
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48312 for 559 contacts (-86.4/contact) +
2D Compatibility (PS) -8433 + (NN) -2577 + (LL) 764
1D Compatibility (HY) -3600 + (ID) 1250
Total energy: -63408.0 ( -113.43 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: