Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQPANCNGQLNQLIPCLSYVQGQATQPAQGCCSGLKSIAG-----SNPACLCSLISANAGSIPGI-NSTLALELPAKCNLQGLNPSLCSGKF-----
1BWO Chain:A ((1-90))
----IDCGHVDSLVRPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG--VNLPYTISLNIDCSRV
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45268 for 517 contacts (-87.6/contact) +
2D Compatibility (PS) -7946 + (NN) -2657 + (LL) 488
1D Compatibility (HY) -4400 + (ID) 1200
Total energy: -60983.0 ( -117.96 by residue)
QMean score : 0.426
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: