Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDCNGLVTTVVSQCSGSYVNGSPPSAGCCGAARAVSDGCLCP-KVTPQIADAVNKQRIQAMASACNRPLPRTCGALQFPSRK
1L6H Chain:A ((1-69))
AGCN---AGQLTVCTGAIAGGARPTAACCSSLRA-QQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPT-CH--------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7557 for 500 contacts (-15.1/contact) +
2D Compatibility (PS) -7164 + (NN) -4953 + (LL) 1008
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -23366.0 ( -46.73 by residue)
QMean score : 0.058
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: