Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCDTSKFTNLQACLPAATGSGSVTSSCCSAMMAYRSNPSCLCSTLVYAKSQLSSINLNNALAIPKACGYSSYIPSGFTCQGITVPR
1L6H Chain:A ((1-69))
AGCNA---GQLTVCTGAIAGGARPTAACCSSL---RAQQGCFCQFA-KDPRYGRYVNSPNARKAVSSCG-----IALPTCH------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12782 for 524 contacts (-24.4/contact) +
2D Compatibility (PS) -7218 + (NN) -2651 + (LL) 1372
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -23429.0 ( -44.71 by residue)
QMean score : 0.209
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: