Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SPIKVVGAKKELPFCNLDLLACVQPFLVNGHGGKLPKGCCEKMKKSTSCMCRFLTAKE--QNLN-AAAHRIFWFCHISVPNCPKI
1N89 Chain:A ((6-67))
-----------------QLAVCASAI-LSG-A-KPSGECCGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC---
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37623 for 357 contacts (-105.4/contact) +
2D Compatibility (PS) -6162 + (NN) -3343 + (LL) 1184
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -50644.0 ( -141.86 by residue)
QMean score : 0.372
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: