Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
APIKVAGGVGNCEKDMQWCIDKTEFFTHGYIYERCCYNMIMKKKCMCLFLKSPKLKIAARNVNNACGRGGLPKDAFSEFKC
1L6H Chain:A ((21-46))
------------------------------PTAACCSSLRAQQGCFCQFAKDPRYG-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5570 for 98 contacts (-56.8/contact) +
2D Compatibility (PS) -2461 + (NN) 501 + (LL) 2476
1D Compatibility (HY) -400 + (ID) 350
Total energy: -5804.0 ( -59.22 by residue)
QMean score : -0.055
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: