Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFNSLLVFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLDSSEKELVKGFFNCVSEKKPRLIS-FNGRTFDIPVLKYRAMVHDVQAEYFHKAG---DKWNSYNQRYSSNWHCDLLESLSDFGAFARVKMNEVCAVFNLPGKIGVDGSQVVDLYDSGRIQEIRDYCETDVVNTYLIYLRFMHHQGRITTRSYNKNIEELLLECEKKAHLRKFKEEWEITCGGRFCVEFK |
4M8O Chain:A ((352-490)) | ------------------------------------------------------------------------------------------ENDEVALLQRFFEHIRDVRPTVISTFNGDFFDWPFIHNRSKIHGL--DMFDEIGFAPDAEGEYKSSYCSHMDCFRWVKRDSYLPQGSQGLKAVTQSKLGYNPIELD-PELMTPYAFEKPQHLSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQHNILLPNKHTD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22819 for 847 contacts (-26.9/contact) +
2D Compatibility (PS) -13978 + (NN) -2851 + (LL) 6572
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -43976.0 ( -51.92 by residue)
QMean score : 0.242
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