Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFNSLLVFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLDSSEKELVKGFFNCVSEKKPRLIS-FNGRTFDIPVLKYRAMVHDVQAEYFHKAG---DKWNSYNQRYSSNWHCDLLESLSDFGAFARVKMNEVCAVFNLPGKIGVDGSQVVDLYDSGRIQEIRDYCETDVVNTYLIYLRFMHHQGRITTRSYNKNIEELLLECEKKAHLRKFKEEWEITCGGRFCVEFK
4M8O Chain:A ((352-490))------------------------------------------------------------------------------------------ENDEVALLQRFFEHIRDVRPTVISTFNGDFFDWPFIHNRSKIHGL--DMFDEIGFAPDAEGEYKSSYCSHMDCFRWVKRDSYLPQGSQGLKAVTQSKLGYNPIELD-PELMTPYAFEKPQHLSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQHNILLPNKHTD


General information:
TITO was launched using:
RESULT:

Template: 4M8O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22819 for 847 contacts (-26.9/contact) +
2D Compatibility (PS) -13978 + (NN) -2851 + (LL) 6572
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -43976.0 ( -51.92 by residue)
QMean score : 0.242

(partial model without unconserved sides chains):
PDB file : Tito_4M8O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M8O-query.scw
PDB file : Tito_Scwrl_4M8O.pdb: