Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDRLKKIHWLLVTNVIALFCIGIVVQYSSAGGKWAPFAIHQLVIFSFFFLLAIAMSFIELDFYLKHAYFFYIAAVISLLVVNFFGLYTMG---ATRWIRIGPISLQPSEFAKVGLILALARYFNKQSVYKMMEFQRLLKALIFIFLPVFLVLKQPNLGTAVIMLFIGASIIFTAIIKRAHLIIYGIISILVIPAIWPSLRSYHKQRILSFLDSSVDPLGIGYNAQQSQIAIGSGGLFGKSFVSGSQTQLGFLPEKHTDFAFAVLSEEWGFLGSMTLIVLYTTLLAIIFSIAYRSKNYFSKLVSIGIFAFFGVHFFINIGMTIGLLPVIGDPLPFLSYGGSTTAASSICIGLLLSSVASMKDLKLKLSISSIERPVV
1YZ6 Chain:A ((27-103))-------------------------------------------------------AFLELDEYPGKEAFMHISEVASTWVRNIRDYLKEGQKVVAKVIRVDP--------RKGHIDLSLRRVTQQQRKAKLQEFKRAQKAENLLKLAAEKLGKDFETAWREVWVPLEEEWGEVYAAFEDAAKDGIDVLKGHVPDEWLPVLKEIIDNYVEVPTVTIDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTYLGAPRYRIDITAPDYYKAEEVLESIAEEILRVIKEAGGEATLLRKEK--------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1YZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58411 for 405 contacts (-144.2/contact) +
2D Compatibility (PS) -7170 + (NN) 5617 + (LL) 13992
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: -49272.0 ( -121.66 by residue)
QMean score : -0.007

(partial model without unconserved sides chains):
PDB file : Tito_1YZ6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YZ6-query.scw
PDB file : Tito_Scwrl_1YZ6.pdb: