Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSKTCNAIKRLLQKESSFVGKDENGNSYYESSEGKRWVMYSNVSEPTTVS------PEWHVWLHYTDDAMPVNSKKRKIKRIPNLTGTKDAYYPNQKIKNYYERWNPNN
1A4U Chain:A ((31-99))
-----------------------------------KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIA
General information:
TITO was launched using:
RESULT:
Template:
1A4U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3541 for 292 contacts (12.1/contact) +
2D Compatibility (PS) -6515 + (NN) -1203 + (LL) 1592
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -7785.0 ( -26.66 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_1A4U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A4U-query.scw
PDB file :
Tito_Scwrl_1A4U.pdb
: