Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVFLNNATKKIEGEYHQSKETNAPVVLILHHHPQYGGSMDSKMIHSIYTSFIDNNFSALKINFRGVGKSTGTFDKGIGELTDAAIAIDWLQEHNPSNVPIWIVGFSFGAWVAMQLTMRRPEIVGFIALSLPATKYDFSFLSPCPVPGLIIQSSNDTISEESDVTELANRLINSVKSDHMEYHIIGDTNHFLRDKEEEVTQIIDNYVKLRLNSAAISSQMVKKEIRIKEYA
3TRD Chain:A ((35-203))
----------------------------IICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGRYDNGVGEVEDLKAVLRWV-EHHWSQDDIWLAGFSFGAYISAKVAYDQ-KVAQLISVAPPVFYEGFASLTQMASPWLIVQGDQDEVVPFEQVKAFVNQI-----SSPVEFVVMSGASHFFHGRLIELRELLVRNLA-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3TRD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131316 for 1428 contacts (-92.0/contact) +
2D Compatibility (PS) -18733 + (NN) -11990 + (LL) 4524
1D Compatibility (HY) -15600 + (ID) 2500
Total energy: -175615.0 ( -122.98 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_3TRD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TRD-query.scw
PDB file :
Tito_Scwrl_3TRD.pdb
: