Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDNHFMSIALSLAEKTLGNVAPNPAVGCIIVKDGVVVGEGHTGIGGRPHAEVAALQSAKGSTHGATMYVTLEPCCHYGVTEPCIIEIIRSGIKKVVVAAIDPDKRVSGGGIKALEEAGITVEQGIMQEEAEKLNIGFFTTRKLHRPFIACKIATTLDGKIATFKGDSKWITSGSTRNWVHELRAKYDAIMIGSNTLINDDPLLTCRLPGLESRSPIRLIIDSQEKLKEKHNVVKTADKVT-TWVIINKKI-EKKIKNINYLIVNSNDKPIPASHTGMTSNQGEYSTDKVCLKDMALKLVSEIGITRLLVEGGRVLTTELLKHDLIDRLIICRSGKILGNDAIP-FIGNLEIQSINNCYQFKKAEIIDFDEDIVEVWDKLQ |
| 2D5N Chain:A ((13-364)) | -MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISMMKEAGIEVREGILADQAERLNEKFLHFMRTGLPYVTLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPNV-TKQPVRVILDTVLSIPEDAKVI--CDQIAPTWIFTTARADEEKKKRLSAFGVNIFT----------------LETERIQIPDV-LKILAEEGIMSVYVEGGSAVHGSFVKEGCFQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQIGRDIKLTAKPT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D5N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192056 for 2866 contacts (-67.0/contact) +
2D Compatibility (PS) -37743 + (NN) -15889 + (LL) 996
1D Compatibility (HY) -26800 + (ID) 6650
Total energy: -278142.0 ( -97.05 by residue)
QMean score : 0.477
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