Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILLELQFYLSLPHIFSYQQMHKNEEISEAKTSRNAEEVKEIVKTQLEGLKQLKKQLKQKLGV
2PID Chain:A ((291-341))
----LKLFTFLPLPEIDHIMQLHVKEPERRGPQKRLAAEVTKLVHGR-EGLDSAKRCTQAL---
General information:
TITO was launched using:
RESULT:
Template:
2PID.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9557 for 281 contacts (34.0/contact) +
2D Compatibility (PS) -5228 + (NN) 470 + (LL) 1096
1D Compatibility (HY) -3200 + (ID) 900
Total energy: 1795.0 ( 6.39 by residue)
QMean score : 0.225
(partial model without unconserved sides chains):
PDB file :
Tito_2PID.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2PID-query.scw
PDB file :
Tito_Scwrl_2PID.pdb
: