Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQDSNASCNTGPFYKGVIKFLNQFQSRVNSEQSREDYVKESIIISLEDAISPFYS--LVD---------KGVCYTIPNSERITLLDICVNQLVDNHRKIVHGVILLLSRLRRNRKSMLFNDKYFC
3L0O Chain:A ((137-216))
--------------------------RVNFDNLTPDYPRERFILETDPKI---YSTRLIDLFAPIGKGQRGMIVAPPKAGKTTILKEIANGIAENHPDTIRIILLIDERPEEVTDIRESTNAIVI
General information:
TITO was launched using:
RESULT:
Template:
3L0O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20055 for 297 contacts (-67.5/contact) +
2D Compatibility (PS) -6957 + (NN) -82 + (LL) 1088
1D Compatibility (HY) -4800 + (ID) 1050
Total energy: -31856.0 ( -107.26 by residue)
QMean score : 0.133
(partial model without unconserved sides chains):
PDB file :
Tito_3L0O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L0O-query.scw
PDB file :
Tito_Scwrl_3L0O.pdb
: