Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFVIATFYHFVKLSNYYDMKDEIKAACDNFELKGTILLAEEGINATISGERNAINKIFNFLCSDYRLKDLTWKESAAKYQPFSKMKVRLKREIVNLGVSNLDTSLRGKYIDPDHWDDFISQPDVLVIDTRNEYEVKLGKFKNAINPYIQYFREFPQWAKSFSKNKNLKVAMYCTGGIRCEKSTAYMKSLGFNDVYHLKGGILSYLERTHNKNGNWEGECFVFDDRIAINSSLAPSNKIKCIFCSNQVSADELKSVSRGQVVCSDCNPS |
| 3GK5 Chain:A ((118-195)) | ------------------------------------------------------------------------------------------------------------------------------VLDVREPFELIFGSIANSINIPISELRE--KW-KILERDK--KYAVICAHGNRSAAAVEFLSQLGLN-IVDVEGGIQSWIEEGY----------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42193 for 538 contacts (-78.4/contact) +
2D Compatibility (PS) -8377 + (NN) -690 + (LL) 11332
1D Compatibility (HY) -8000 + (ID) 1350
Total energy: -49278.0 ( -91.59 by residue)
QMean score : 0.460
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