Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLEYTLTTNSVEVTVLPVYIEEQSIPYENCYVWMYNVKIKNKSLSTIQLLSRHWQIIDYKGKINEIVGAGVIGEQPVIKPGEVFKYTSGTYLNAPSGIMQGKYEFLNEENTKVFEVTIPSFSLDSPYTNIRPH
1XQ4 Chain:A ((15-129))
-------------VSVTPRYVPEQSDPSQQQYVFAYTVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYTSGCPLPTPIGTMRGTYHCVG-ENGIPFEVPIAEFLLAMPRT-----
General information:
TITO was launched using:
RESULT:
Template:
1XQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48622 for 769 contacts (-63.2/contact) +
2D Compatibility (PS) -12730 + (NN) -6204 + (LL) 1384
1D Compatibility (HY) -6400 + (ID) 2600
Total energy: -75172.0 ( -97.75 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_1XQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XQ4-query.scw
PDB file :
Tito_Scwrl_1XQ4.pdb
: