Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKKYDETKVKPAISTSQEPKRINGSKFQSVLSKRRYDINFDDKKYAVKTVKTRFLETEQQSSKLRDLLESIPVIGRFLAKIFTSEKETYKKLQLQIDRSSKIRNESRIDDKYTEEISSKLKKSNIEQVDDKKSRSP |
1UIR Chain:A ((63-81)) | ----YHETLVHPAMLTHPEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140 for 69 contacts (-2.0/contact) +
2D Compatibility (PS) -1869 + (NN) 85 + (LL) 308
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -3766.0 ( -54.58 by residue)
QMean score : 0.666
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