Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLNFNASFSNLYTRNGLIKLDEAFLDYIKSCDEDLFCSLIEAREETTPSSASFQYWTSESRKKEPVSSKNTASSSVSFQCATLESRKHPMSASQMTDSQLIIDLAYLLDGFIAKLFNVEKEIEELKKKHNDFAVIYKCKRLFVQRYALKKYADTENIDIDYVTSELNCFLTLPTTEKIFAEQVMHWFEDRENHKDEIELAAQYAAWRVKNKRSILFNIHRKIDHENLISFSKKEVDKVEVLYSNKIKRRYGFDLTSEKVSLDKALDNAHYCIFCHKQNKDSCSKGLLETSLSFQHMTLKSKKKEEWIPVSSTGMTGKCTQMSEGCIKSLLNNYNTFKRSPLKVELHGCPLEQKISEMNLVKSEGYNIASLAIAMIDNPLCAATGYKICND---CMNSCIYQK---QEPVNVPMVETRILDDVLSLPYGFEIYSLLSRWNPLNFQQ---PLPKENTGKNVLVVGLGPAGFNLAHHLLNDGHNVIAIDGLKIEPLNDDLQPIKDFKHEKLSERIADGFGGVAEYGITSRWDKNYLKIIRLLLERRENFAIYGGIRF------CGTVTVDDAFNLGFNHIALALGSGKPRMIKIKNILARGVRMASDFLMSLQLTGA-LKLDSLANLQVRMPIVIIGAGLTAIDTATEALAYYPIQAEKFLLRYEVLVDKYGKDYVEKDWTEEEREIADEFISHAQLICKEKELAKKENREAKILELMQSLGGVKVVYRKELKDSPSYRLNSEEVQNALSEGIYFIENSEPVEIMTDKYSHIESIKLIDTKSHEIKYIKARSILIAAGTEPNTVIATEDKKHFKLSNGYFTHLNSLGEEIDPILSPKMQNKDRILVYKQGGRTISFFGDLHPSYSGSVVKAMASAKNGYPIISQLLSGANTATVIPISSPITSVLNTGISASHTQLYECYNIRVTFITKDVISVPRHTAIQTLWLKSNLHQKGYHSSSSFLSPQCVTLGFSKIGYKQTQYATFSAKLTKNWTPVLRTGMTLSHRTNEEFFNRIKEQFTAKVVKVQYLTDKVVEVVIKAPLAAKNFQPGQFFRLQNFETNSRKINNTTFAMEGIAVTGTEVNKKKGLISTIVLETGGSTNLCRYLREGEQIILMGPTGRPTEVY |
| 4YRY Chain:B ((48-310)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSGCPVEIDIPGFIRKLRDGKLEESYRILKSYNNLPAVCG-RVCPQEVQCESRCVVGKMKDSEPVAIGRLERFVAD-----------------WAAENLEEDVKPLAGSKKEK-VAVVGSGPAGLTAAADLAKMGYHVDIFEAF----------------HKP---------GGVLVYGIPE------FRLPKRIVEREVSYIRKLGVNFHLNTVVGKTVKVKELLSE-YDAVFIGTGAGTPKFMGIPGTNLNGVYSANEFLTRVNLMKAYLFPEYDTPIRVGKKVAVIGAGNTAMDAARSALR---LGAEKVYIVYRRTEREMPARREEYHHALEEGIEFLWLTLPIRYIGDANGNVEAMECVRMELKEADGSGRPRPVPIEGSNFVLEVDMVIEAIGQGPNRVLLSEFPGLELNERGYIKADEDTGATSVKGVFAGGDIVTGAATVIKAMGAGKKAAQFIHSYLTGEWNPWQK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YRY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106036 for 1849 contacts (-57.3/contact) +
2D Compatibility (PS) -25974 + (NN) -2700 + (LL) 48140
1D Compatibility (HY) -13600 + (ID) 3950
Total energy: -104120.0 ( -56.31 by residue)
QMean score : 0.353
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