Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKLSYILIVIFISFPILLAASENNEKTQIKDIKCIGNERVGDQTIKFYIKLEPDSYVNDDDIDSIIKSLYKTKLFASVHAYIDNEKKLVIKVQENPLINKVILKGNKQFKSKELLNNVIQSKPLTIFTETKLQSDLVNLVTLYRHNGKIGVKVEYELDKLDGNRVNLIFKVKEGKTSRVKSVRFIGNKNFSENELERAIKVQSNDIFNKLFRAIFKGGNHYSPQYLLTNEELLDRFYSSKGYINNSIQPIAEIDNNNQIELTFLIDEGQQYLFGSNKVNVEAEIQDPDLKEKVLELITK-EDNKVFDRVKVSNAVEKINKYLNEIGYIFAKVN--PEYTQHGNVVDVTYRVLPGKKIYINQITIDGNDRTLDKVIRSKLSVAEGDAYNTSEVQKSRRRLIGSDFFETVKINSYAI--NDNAVNLDLNVKEKNTTSLYLGGGVSFPGGAFIKTDFKDRNLFGTGKELSFALEKSQYVFSTNVEV--VENNFNDSDTSLGVDVFYERQD----KPNTTFDSCDWGGIAQLLHKIIENLTNSIRYSYKYNHIHMDN---KGGKDEDISEI---IRSQQGEY-QISSVGYTLA----YNKLDNLYAPREGYLLRLSQDISGLGGNMNFLKSEFLSFYTHPILSKIDDDIILRFKMAAGYIFSYTDKELNIGQRFFKGG-NEIRGFDLSGIGPRA--------KDKNKSSLGGKTYFNLTQQVDFPLPKLYDYV--GIKGSLFVDYATLFGLDIKK---EYEG--KYHDSKLVRVSPGFGFSMPSPFGGRFRLDFGFPLAKEPYDIIPSSNIKFSIEVGI |
| 4K3C Chain:A ((15-503)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LDNELNQLLTHFKAGQLFRKTELSIIEEQIKQILGDRGYGSAKVDLYPKFNEEDHTVQINFIVDAGRRIYVRKIRFEGNDVTADSTLRREMRQQEGAWLSTSAVSLAKSRLERTGFYETVEMSMPTVKNTDDQVDIIYKIKERNTGSINFGVGYGSGSGLSYNAGITQDNFLGMGSSL--GLNGSRNTDSTNVNLSYTEPYFTKDGVSLGGNIFYEDYDNSARKASAAYKRKTYGASGTLGFPVDEN--NSYYLGLGYTHDKLRNVEREYTREKYVNSMKFPINPQNSHYDRIQSADFDLSFGWNYNNLNRGYFPTAGSSANISGKLT-LPGSDNKYYQVGTNFSGYIPLNS-EHKWVIATKGGLAYTNSFGGKEVPFYQLYSAGGMGSLRGFAGGSIGPKAIYYREDGFKAPSQDVIGGNAMVNASLELIIPAPFISDKYQHNVRTSVFVDAATVWNTKWKQSKADYPNLPDFGDYKRVRASAGIALQWQSPIGPLSFSYAKPIKKYAGDEIEQFQFTVGSTF--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -3095 for 3114 contacts (-1.0/contact) +
2D Compatibility (PS) -47810 + (NN) -4039 + (LL) 20268
1D Compatibility (HY) -23200 + (ID) 6650
Total energy: -64526.0 ( -20.72 by residue)
QMean score : 0.222
|
|
|