Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINEEVVKENLKEVIERKSGKDVIALGIISSIVIKGKDIGFVLEISGDTQANEELRKNCEKAVKAIPGVGKVTVVAAGRKQAGQQRAKLHIEGVKNIIVVASGKGGVGKSTVALNLAFSLAKLKHKVALVDADIYGPSIPKMLGAEKLKPKIQGSRIIPI--EKYGLHTISIGYFIDKDCAAMWRGPMITKALYNLLMGTKWSDIEYLVVDTPPGTGDVHLSLMENFNLTGGIIVSTPQELALVDARKIYNMFTKLSVPIFGIVENMSYFIQDN--SKIYIFGKDGTKVMSEELGIKLLGRIPLDPKICYASDCGNPLMLSEDLAGIYEDFAKDIRSFI |
| 3KB1 Chain:A ((4-240)) | --------------------------------------------------------------------------------RVTDEDIKERLDKIGFRIAVMSGKGGVGKSTVTALLAVHYAKQGKKVGILDADFLGPSIPHLFGLEKGKVAVSDEGLEPVLTQRLGIKVMSIQFLL-----------LIAGMIREFLGRVAWGELDYLLIDLPPGTGDAPLTVMQDAKPNGAVIVSTPQELTAAVVEKAITMAEQTKTAVLGIVENMAYFECPNCGERTYLFGEGKASELARKYKIEFITEIPIDSDLLKLSDLGRVEEYEPDWFEFFPYLEHH----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KB1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154507 for 1823 contacts (-84.8/contact) +
2D Compatibility (PS) -24237 + (NN) -14121 + (LL) 6904
1D Compatibility (HY) -18000 + (ID) 4000
Total energy: -207961.0 ( -114.08 by residue)
QMean score : 0.435
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