Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKGKELSSDVYEANIVLNDKTMATLPKIGYHMLNDQLVMHNHVTEEKVVISRDFHFLKAVKFSDDYKLTFYNALGNEFFEYKKYD--LQYSNISDKNKFIGLNCAKKIQFESRRVI
1CF5 Chain:A ((15-52))
------------------------------------------------------------TKFIEDFRATLP-------FSHKVYDIPLLYSTISDSRRFILLNLTSYAYETISVAI
General information:
TITO was launched using:
RESULT:
Template:
1CF5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3509 for 132 contacts (-26.6/contact) +
2D Compatibility (PS) -3781 + (NN) -84 + (LL) 5036
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -6438.0 ( -48.77 by residue)
QMean score : 0.275
(partial model without unconserved sides chains):
PDB file :
Tito_1CF5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CF5-query.scw
PDB file :
Tito_Scwrl_1CF5.pdb
: