Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQYTFRIDNKDPLYKKLIKLPTAYYRLKHDGNKHNIHSNNNVILEIGNNTNGVKLRWENDKIVLHKGSSALY
3IYJ Chain:F ((308-339))
------------------------YWLFRAQGMNNGIAWNNLLFLTVGDNTRGTNLTISVASDGTPLTEYDSS
General information:
TITO was launched using:
RESULT:
Template:
3IYJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3668 for 81 contacts (45.3/contact) +
2D Compatibility (PS) -3507 + (NN) -1550 + (LL) 1736
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -3403.0 ( -42.01 by residue)
QMean score : 0.094
(partial model without unconserved sides chains):
PDB file :
Tito_3IYJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IYJ-query.scw
PDB file :
Tito_Scwrl_3IYJ.pdb
: