Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNRIVIGISGASGSIYGMHILKALKGADCETHLVISRAGKTTIAHEITERLEDI-TSLADFYYSEEK-IGEKIASGS--FKTSGMIVAPCSMKTMSEIASGVTSNLLTRAADVTLKERRKLVLIVRESPLHLGHLQNMLKLTEMGAIIAPPMPAFYTKPKSLEDIISHSISKVLSLFDIKLPDFKEWQGV
2EJB Chain:A ((3-183))
---KIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAKVVLK-------EEVLKGLKNVRIHEENDFTSPLASGSRLVHYRGVYVVPCSTNTLSCIANGINKNLIHRVGEVALKERVPLVLLVREAPYNEIHLENMLKITRMGGVVVPASPAFYHKPQSIDDMINFVVGKLLDVLRIEHNL-------
General information:
TITO was launched using:
RESULT:
Template:
2EJB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104760 for 1397 contacts (-75.0/contact) +
2D Compatibility (PS) -18578 + (NN) -10417 + (LL) 1428
1D Compatibility (HY) -20000 + (ID) 3650
Total energy: -155977.0 ( -111.65 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_2EJB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EJB-query.scw
PDB file :
Tito_Scwrl_2EJB.pdb
: