Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFDCLIIFIIVVCIIISITRGFIKELCALMFLFLSAFLTANHYDFFTINYSKYFNSKAMQNIFSTISVFIIFNLIFMIVNNWLMYILTPIRLGLIDRVTGTFVGALRGVLLSYVLFFAMHLYCYTVHDKKEEQSKIEAEDILPNWIINSYSYQALFATVEDIVDVYVPESLILKIKEIGEGMANQEKLKGDKKEE |
2KXA Chain:A ((3-12)) | ---------------------------------------------------------------------------------------------------FGAIAGFIEGGWTGMIDGWYGS--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KXA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144 for 32 contacts (-4.5/contact) +
2D Compatibility (PS) -919 + (NN) 818 + (LL) 17588
1D Compatibility (HY) -400 + (ID) 150
Total energy: 16793.0 ( 524.78 by residue)
QMean score : 0.029
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