Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSSNDETKKKHEIDDLPKFFKEKSKEIGKAFSNK-VVEISIIRSISVTSDEQEFSFKLRLLTIVDKDTHSIWILR
3NRN Chain:A ((189-244))
----------KAVIDELERIIMENK---GKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRETVKLIGRD
General information:
TITO was launched using:
RESULT:
Template:
3NRN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1933 for 235 contacts (8.2/contact) +
2D Compatibility (PS) -5643 + (NN) 1886 + (LL) 696
1D Compatibility (HY) -4400 + (ID) 950
Total energy: -6478.0 ( -27.57 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_3NRN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NRN-query.scw
PDB file :
Tito_Scwrl_3NRN.pdb
: