Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMVKGILCDWLGVTELQESQKIDAEQFQRIFSALKKWQEAQKVNTEQFEKVFSALEEKIGTEQFQSMQEYLNGLQKKFTGLEEKAGTLIETVGEQEKIMLTCCIIASVITLAAISFITFCIYQGVKSGRERQRSLSDISAQNLMNQTHQAQNFM |
| 2YJG Chain:A ((20-61)) | ----------------------------ERIQGILRSK-------MSEEDIVKRALENPIGTKRLQDLAEGKKNIVIITSDHTRPVPSRITLPLLLDEIRKKNKSANVKILIATGFHRGTTLQEMKAKFGEDLVENEQFVVHDSRNSENMELIGT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5868 for 126 contacts (46.6/contact) +
2D Compatibility (PS) -3433 + (NN) -262 + (LL) 3280
1D Compatibility (HY) -1200 + (ID) 600
Total energy: 3653.0 ( 28.99 by residue)
QMean score : 0.245
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