Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSKKSEGRIYFAIEVDIFRYIATYYMLCEQKGSQTEEGVVHNDKYKEQRKKLYGKDEEQKGNRK
1ERD Chain:A ((3-19))
--------------------------MTCEQAMASCEHTMCGYCQGPLYMTCIGITTDPECGLP-
General information:
TITO was launched using:
RESULT:
Template:
1ERD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5139 for 78 contacts (65.9/contact) +
2D Compatibility (PS) -1605 + (NN) 1114 + (LL) 2388
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 5586.0 ( 71.62 by residue)
QMean score : -0.223
(partial model without unconserved sides chains):
PDB file :
Tito_1ERD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ERD-query.scw
PDB file :
Tito_Scwrl_1ERD.pdb
: