Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAYNTAPKDLRLIVFLGHLTINNFIILYSIVSIIRNFMSIDKKLKILPNKVLIIVTLVPKDTEKMLQDDKNSKFIMLIY
1K8B Chain:A ((47-67))
--------------------------------TIIRNFRELAKAVNRDEEFFA---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K8B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1602 for 91 contacts (17.6/contact) +
2D Compatibility (PS) -2123 + (NN) 28 + (LL) 5188
1D Compatibility (HY) -800 + (ID) 300
Total energy: 3595.0 ( 39.51 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_1K8B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K8B-query.scw
PDB file :
Tito_Scwrl_1K8B.pdb
: