Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPARSAEDVITSLIEFVNKRKVTITREEMLKIAQLVRIKLSNDEIEHYSKELT-MLDWIHDILLRVNTKDVSPIRYGSIDKDIHVRDDVVNFQSMKEEILSNT-KSEHGYFVVPKVIND
3H0M Chain:C ((2-92))
-----------------------VDREWVLKIAKLARLELKEEEIEVFQKQLSDILDFI-DQLKELDTENVEP--YIQEFEETPMREDEPHPSLDREKALMNAPERKDGFFVVPRVV--
General information:
TITO was launched using:
RESULT:
Template:
3H0M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13094 for 354 contacts (-37.0/contact) +
2D Compatibility (PS) -9472 + (NN) -2161 + (LL) 2268
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -30559.0 ( -86.32 by residue)
QMean score : 0.356
(partial model without unconserved sides chains):
PDB file :
Tito_3H0M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H0M-query.scw
PDB file :
Tito_Scwrl_3H0M.pdb
: