Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDKKDNAKANSGKIMYPNFFEIDFIINEKEIDCNVTRMLIEKAKKGHKFGETWEDYYRSISDNKRISIYKNV
2J85 Chain:A ((92-119))
---------------------------EGKVLSDKEIKDMYRQGK--ISFYEVWHHH----------------
General information:
TITO was launched using:
RESULT:
Template:
2J85.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9834 for 108 contacts (91.1/contact) +
2D Compatibility (PS) -2568 + (NN) 2395 + (LL) 2400
1D Compatibility (HY) 800 + (ID) 50
Total energy: 12811.0 ( 118.62 by residue)
QMean score : 0.203
(partial model without unconserved sides chains):
PDB file :
Tito_2J85.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2J85-query.scw
PDB file :
Tito_Scwrl_2J85.pdb
: