Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILAIDTVGTGGSSIAIIDHDGNCFVEHNSISNSHAESFFQILNTLFNKHNYNYSKLDHLAVVVGPGSFNGIRVGISAAKGINLVTNKPLYGVNALEVQAYAMSLLCANNKKNIRAMIKSSQGFYMQLFDCNLLPLSDPTTTHDAQCLGTRTSGNNYITYMDCNLPKLDASHAGLLVHYRLKNKQKLNEVEALYLNELQYMKLL
2GEL Chain:A ((1-99))
MRILAIDTA-TEACSVALWN-NGTINAHFELCPREHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGAWRKTGATRVLAAIDARMGEVYWAEYQRDAQGVWQGEETEAVLKPERVGERLKQLSGEWATVGTGWSAWPDLAKECGLTLHDGEVSLPAAEDMLPIASQKLA
General information:
TITO was launched using:
RESULT:
Template:
2GEL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69400 for 749 contacts (-92.7/contact) +
2D Compatibility (PS) -10526 + (NN) -3136 + (LL) -128
1D Compatibility (HY) -8400 + (ID) 1650
Total energy: -93240.0 ( -124.49 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_2GEL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GEL-query.scw
PDB file :
Tito_Scwrl_2GEL.pdb
: