Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDEDLELLKFYYEVGIDCTLTEGNEEKKVEKEKNSKAIQSPTIQAEVQKKEQQSMFPSDWIIEARKLASKCNSMDELRSAVKSFEGCEIKKTSTNTVFSDGNQSAKIMLVGEAPGANEDLKGIPFCGASGMLLDKMLSAI-NLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVEKHIALISPHILILVGGISCYSLL----DNTKTISTLRGRFHTYTNQYLSYSITTAVIFHPAYLLRQPAQKRLAWEDLKKIREYLNSTNNCTGV
4ZBX Chain:A ((2-187))
------------------------------------------------------------------------DSLEKIKEEVISCKKCKLWQFRTNAVPGEGYPKAEIMFVGEAPGENEDKEGRPFVGAAGKLLTQMIKEILGLERDQVFITNVVKCRPPNNRDPEEDEITACSPYLDRQIDIIMPKIIVTLGRHSTKYIFSKMGENFSSITKVRGK--SYVWKYKEKEIIVFPTYHPAAALYNPNLRKILEEDFKKIRELAITP------
General information:
TITO was launched using:
RESULT:
Template:
4ZBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111921 for 1500 contacts (-74.6/contact) +
2D Compatibility (PS) -19975 + (NN) -12999 + (LL) 6004
1D Compatibility (HY) -11600 + (ID) 3500
Total energy: -153991.0 ( -102.66 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_4ZBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ZBX-query.scw
PDB file :
Tito_Scwrl_4ZBX.pdb
: