Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELAVGNNAPDFSLPTDSGENLSLSDFFDKKNIVLYFYPKDDTPGCTLEAKGFRDKINDFSSLDTVIIGASRDSIKCHASFKAKYSLPFYLISDENAKMLEKYGVWVEKSMFGKKYMGIERTTFLIDKKDKIVRIWENVKVSGHVNEVLEAVKKI
3IXR Chain:A ((25-154))
----------------------TLSDYTNQW-LVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEKTMY--QVIGIERSTFLIGPTHRIVEAWRQVKVPGHAEEVLNKLKAH
General information:
TITO was launched using:
RESULT:
Template:
3IXR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71908 for 937 contacts (-76.7/contact) +
2D Compatibility (PS) -13880 + (NN) -6367 + (LL) 348
1D Compatibility (HY) -12400 + (ID) 2850
Total energy: -107057.0 ( -114.26 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_3IXR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IXR-query.scw
PDB file :
Tito_Scwrl_3IXR.pdb
: