Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYKISKLILSALKANKYTKVIVLFSSIFVILFSVIYCNYSLRDNFLSSYRDSSVSLKSVLENSIIKKYHYLLIEKHHIKYKSFDYINQLVKLRAELLQSVGEVKDLGLILYDQNSRIIFSHFNTQDHDYEQLLTNDEIDKLLNNQEIFYTIGHTLISIFPIFHENDTKPSFFLKIIQNHDNFYVMVYSLFLTFLGLLLIILILVMLYLHFSNTQMLVKQHKTNIELQQMKEALEQENTNKLKFFASVTHELRTPLNAIIGFAELIKNETLGSMDNYQYKEYVDDIYNAGTHLLALINDVLDFSKAESSSLTVEKVKFNLNKIIDSCLNMLSPKLKETGISL--EKEIPNRQLLVIADPKRMKQVIINLLSNSIKFTPKDG---LIRMVIKENIEKNLLTIEFHDNGIGIMQQDIYKVMSVFGQADSGYRNEGTGIGLPLSKKLVELMGGTFNIKSEAKLGTTITLNFFYEEQTCEDLIDF |
4JAU Chain:A ((11-239)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ERLKRIDRMKTEFIANISHELRTPLTVIKGYAEMIYN-SLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPC-PVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVE--DNGIGIPDHAKDRIFEQFYRVDS-------GLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74883 for 1416 contacts (-52.9/contact) +
2D Compatibility (PS) -22640 + (NN) -2475 + (LL) 21736
1D Compatibility (HY) -19200 + (ID) 3850
Total energy: -101312.0 ( -71.55 by residue)
QMean score : 0.408
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