Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKLHDQKVTENLQDTPKKATIEGKDFEQSRQKETSVQTETQSSVNTGVRT-SQKPKSQAVSFSIGKGSTEKKSSNKPKSSEKGIVCLSHKKIKKKEGFLSLLKRFVKRVLEKHF
3H5C Chain:A ((99-164))
--------------------------------------TETQ--IKRGLHLQALKPTKPGLLPSLFKGLRETLSRNLELGLTQGSFAFIHKDFDVKETFFNLSKRYFDTECVPMN
General information:
TITO was launched using:
RESULT:
Template:
3H5C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9767 for 270 contacts (36.2/contact) +
2D Compatibility (PS) -6563 + (NN) -374 + (LL) 2548
1D Compatibility (HY) -2800 + (ID) 1100
Total energy: 1478.0 ( 5.47 by residue)
QMean score : 0.311
(partial model without unconserved sides chains):
PDB file :
Tito_3H5C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H5C-query.scw
PDB file :
Tito_Scwrl_3H5C.pdb
: