Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSVIEITSIKRRFCAYLIDMAVLLIPNLLIIILLKNFPLILDLLYMCVNCSYFTYFISSAAQATPGQQLMNIHTISLDGSKINLSLAFDRSISQFFLHLLNNVIAILIELFQEQNELVSALIILGVIMLLLTICWYLVACFSQEKQTYHDMLFDTIVVKGAIK |
| 1V54 Chain:K ((6-20)) | -------------------------------------------------------------------------------------------------------------------------------------------------APDFHDKYGNAVLASGATF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3854 for 57 contacts (-67.6/contact) +
2D Compatibility (PS) -1365 + (NN) 1473 + (LL) 14704
1D Compatibility (HY) -400 + (ID) 100
Total energy: 10458.0 ( 183.47 by residue)
QMean score : 0.013
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