Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENLAYKLIKVTEAAALAAYKLVGLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPMLYVGEKVGTGNGPEIDIAVDPLEGTTICAHYKQSAMSVLAAAKKGDFLHAPDIYMEKIAIGKDLPIGVVSLKNSVEKNFDNLAQAKKCEVNDLTVTILKRERHNNLILKIRKLGARVKLIDDGDIAA--IVSLINGSHDIYIGIGGAPEGVLAAAALSSIGGQMEGRLIF------DTHQSKE-------RAKILNIDDLEKIYSIKDMVKGESV-FIATGVTSGELVDGVKFGYNICSTSSLIMLHNKVIKLQTIQNLC |
| 3D1R Chain:A ((6-322)) | ---LAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIMLNQVNIDGTIVIGEGEIAEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALAVLAVGDKGCFLNAPDMYMEKLIVGPGAK-GTIDLNLPLADNLRNVAAALGKPLSELTVTILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMNGRLLARHDVKGDNE-NRRIGEQELARCKAMGI-EAGKVLRLGDMARSDNVIFSATGITKGDLLEGISRKGNIATTETL-LIRGKS-TIRRIQSIH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3D1R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -177800 for 2643 contacts (-67.3/contact) +
2D Compatibility (PS) -32764 + (NN) -14575 + (LL) 888
1D Compatibility (HY) -26000 + (ID) 6850
Total energy: -257101.0 ( -97.28 by residue)
QMean score : 0.567
|
|
|