Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSFCVKAPAKINLFLHVVEKKETGYHLIEGLFVFANLSNFLEIKVGEKDFRYDNPIVEFVNSELKISNKYNTVMRAVNLLLRHAPVRTKVTVKVVKNIPTSAGLGSGSSDAGAVIRTLGKLWK--IDRPILNEIALSVGADVPASIDSKPVLVRGIGEELCYINKFSLPTNI---VLAKPKKKFLSTPEVF---SKYGGNFSKPIEWRDD------TEKDLLKLLKETENDLQEIAISLVPEIRDVILALESQEGSILSRMSGSGVTCFGIFDSEENAKTAAVNIREKQPEWWVCDAQLIV |
| 4DXL Chain:A ((17-283)) | --AVTVRAPGKVNLYLAVGDLRDDGYHELTTVFHAVSLAD--DVTVRDADVLSIDVVGQ--GEGTVPTDERNLAWQAAELFADHVGRAPDVSIFINKDIPVAGGMAGGSADAAAVLVAMNELWHAGVPRRDLHHLAAQLGSDVPFALHGGTALGTGRGEQLATV----LARNVFHWVFAFADGG-LATPQVFKEIDRLRENGDPPRLAEADELLGALAAGDARRLAPLLGNELQAAAVSLNPELRRTLRAGESA-GALAGIVSGSGPTCAFLCTSADDAVQVSAELAGAGVCRTVRVASGPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DXL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98483 for 2145 contacts (-45.9/contact) +
2D Compatibility (PS) -27447 + (NN) -5183 + (LL) 1228
1D Compatibility (HY) -8400 + (ID) 3950
Total energy: -142235.0 ( -66.31 by residue)
QMean score : 0.403
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