Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSVSIMDLIPIQRGPKNWLKDKGEEILNLVRNYKKISDQKLRKIFYLLIKSAQLSKKSSRKVEIIEIAKNLFKAGISINIISQITGLSTDRIA
1C3Z Chain:A ((22-50))
------------------------EESLNKVRNREEVDDPKLKEHAFCILKRAGFIDASGEFQLDHIKTKFKENSEHPEKVDDLVAKCAVKKDT
General information:
TITO was launched using:
RESULT:
Template:
1C3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7120 for 127 contacts (-56.1/contact) +
2D Compatibility (PS) -3129 + (NN) -2506 + (LL) 1404
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -13151.0 ( -103.55 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_1C3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C3Z-query.scw
PDB file :
Tito_Scwrl_1C3Z.pdb
: